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  "Title": "Multidimensional Analysis of Phenotypic Plasticity in\nEco-Evolutionary Contexts",
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  "Description": "Provides novel methods for analyzing phenotypic plasticity\nacross multiple traits and environmental variables, with\nspecial focus on insect-fungus host-pathogen systems.\nImplements original multidimensional plasticity indices and\ninteraction analyses not available in other packages.",
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    "host_pathogen_interaction",
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        "temperature",
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        "virulence"
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        "resistance"
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        "year",
        "n_observations",
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        "eos",
        "pos",
        "los",
        "ndvi_max",
        "ndvi_min",
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        "ndvi_mean",
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        "gpp_total",
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        "senescence_rate",
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        "total_precipitation",
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        "total_gdd",
        "budburst_doy",
        "flowering_doy",
        "senescence_doy",
        "data_completeness",
        "elevation",
        "latitude",
        "longitude",
        "soil_type",
        "soil_pH",
        "slope",
        "phenology_type",
        "productivity_class",
        "sos_anomaly",
        "eos_anomaly",
        "los_anomaly",
        "water_use_efficiency",
        "temperature_efficiency",
        "sos_trend",
        "eos_trend",
        "parameter_id"
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      "rows": 3150,
      "table": true,
      "tojson": true
    },
    {
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      "title": "Spatial Phenological Data",
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        "longitude",
        "latitude",
        "elevation",
        "mean_annual_temp",
        "annual_precipitation",
        "soil_type",
        "soil_pH",
        "soil_organic_carbon",
        "sos",
        "eos",
        "los",
        "ndvi_max",
        "land_cover",
        "forest_type",
        "protected_area",
        "years_since_disturbance",
        "disturbance_type",
        "climate_zone",
        "phenology_class",
        "productivity",
        "productivity_class",
        "species_richness",
        "aboveground_carbon"
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      "rows": 2000,
      "table": true,
      "tojson": true
    },
    {
      "name": "pheno_spatial_sf",
      "title": "Phenological Spatial Data as Simple Features",
      "object": "pheno_spatial_sf",
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        "data.frame"
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      "title": "Analyze Correlations Between Phenological Parameters",
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      "title": "Analyze GAM relationships",
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    {
      "page": "analyze_mixed_effects",
      "title": "Analyze Phenology with Mixed Effects Models",
      "topics": [
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    {
      "page": "analyze_temporal_trends",
      "title": "Analyze Temporal Trends in Phenology",
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      "title": "Demo Dataset for Plasticity Analysis",
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      "page": "fungi_insect_data",
      "title": "Fungi-Insect Interaction Dataset",
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    {
      "page": "host_pathogen_interaction",
      "title": "Host-Pathogen Interaction Analysis",
      "topics": [
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    },
    {
      "page": "host_pathogen_interaction_extended",
      "title": "Extended Host-Pathogen Interaction Analysis",
      "topics": [
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    },
    {
      "page": "multidim_plasticity",
      "title": "Calculate Multidimensional Plasticity Index (MPI)",
      "topics": [
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    {
      "page": "optimize_multidim_environment",
      "title": "Multidimensional Environmental Optimization",
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    {
      "page": "perform_cluster_analysis",
      "title": "Perform Cluster Analysis on Phenological Types",
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      "page": "perform_pca_analysis",
      "title": "Perform Principal Component Analysis",
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    {
      "page": "pheno_parameters",
      "title": "Extracted Phenological Parameters",
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      "page": "pheno_spatial_sf",
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      "page": "pheno_time_series",
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    {
      "page": "plasticidad_ejemplo",
      "title": "Example dataset para plasticidad fenotipica",
      "topics": [
        "plasticidad_ejemplo"
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    {
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      "title": "Plasticity Meta-Analysis",
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      "page": "plasticity_meta_analysis_extended",
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      "page": "plasticity_tradeoffs",
      "title": "Plasticity Trade-off Analysis",
      "topics": [
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    {
      "page": "plasticity_tradeoffs_extended",
      "title": "Extended Plasticity Trade-off Analysis",
      "topics": [
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    },
    {
      "page": "plot_density_ridges",
      "title": "Plot Density Ridges of Phenological Parameters",
      "topics": [
        "plot_density_ridges"
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    },
    {
      "page": "plot_internals",
      "title": "Internal plotting function for multidimensional plasticity",
      "topics": [
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      "title": "Multidimensional Plasticity Visualization",
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      "page": "plot_multidim_plasticity_extended",
      "title": "Extended Multidimensional Plasticity Visualization (SAFE)",
      "topics": [
        "plot_multidim_plasticity_extended"
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    },
    {
      "page": "plot_parameter_heatmap",
      "title": "Plot Phenological Parameter Heatmap",
      "topics": [
        "plot_parameter_heatmap"
      ]
    },
    {
      "page": "plot_productivity_climate",
      "title": "Plot Productivity vs Climate Relationships",
      "topics": [
        "plot_productivity_climate"
      ]
    },
    {
      "page": "plot_reaction_norm",
      "title": "Plot Reaction Norms for Phenotypic Plasticity",
      "topics": [
        "plot_reaction_norm"
      ]
    },
    {
      "page": "plot_seasonal_curves",
      "title": "Plot Seasonal Phenological Curves",
      "topics": [
        "plot_seasonal_curves"
      ]
    },
    {
      "page": "plot_spatial_map",
      "title": "Plot Spatial Phenology Map",
      "topics": [
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    },
    {
      "page": "print.plasticity_meta_analysis_extended",
      "title": "Print method for plasticity_meta_analysis_extended",
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      "page": "print.plasticity_tradeoffs_extended",
      "title": "Print method for plasticity_tradeoffs_extended",
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      "title": "Print method for safe_multidim_result",
      "topics": [
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      "page": "run_complete_analysis",
      "title": "Run Complete Analysis Pipeline",
      "topics": [
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    },
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      "page": "safe_multidim_plasticity",
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    {
      "page": "simulate_plasticity_data",
      "title": "Simulate Phenotypic Plasticity Data",
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